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EDP09376 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP09376" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP09376Predicted protein (1850 aa)    
Predicted Functional Partners:
DDB1
UV-damaged DNA binding complex subunit 1 protein (1147 aa)
     
  0.979
CDC6
Pre-initiation complex, subunit CDC6 (940 aa)
     
   
  0.962
CUL2
Cullin (782 aa)
       
  0.949
PCN1
PCNA proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (268 aa)
     
  0.783
RIR1
Ribonucleoside-diphosphate reductase large subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (878 aa)
     
   
  0.743
CUL1
Ubiquitin ligase SCF complex subunit cullin (725 aa)
       
  0.742
CUL3
Cullin (744 aa)
       
  0.742
RFC1
DNA replication factor C complex subunit 1 (1182 aa)
     
    0.723
RFC4
DNA replication factor C complex subunit 4 (332 aa)
     
    0.705
ORC1
Origin recognition complex subunit 1 (890 aa)
     
   
  0.670
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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