STRINGSTRING
EDP09384 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP09384" - Proline oxidase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP09384Proline oxidase (562 aa)    
Predicted Functional Partners:
ALD1
Aldehyde dehydrogenase (548 aa)
   
  0.943
PCR1
Pyrroline-5-carboxylate reductase (347 aa)
     
  0.923
EDP02704
Predicted protein (321 aa)
       
  0.904
EDP06867
Predicted protein (259 aa)
     
 
    0.903
EDP06489
Predicted protein (252 aa)
     
 
    0.902
EDP09196
Predicted protein (221 aa)
         
    0.900
EDP08082
Predicted protein (258 aa)
         
    0.900
EDP06998
Predicted protein (253 aa)
         
    0.900
EDP06696
Predicted protein (336 aa)
         
    0.900
EDP06695
Predicted protein (274 aa)
         
    0.900
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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