STRINGSTRING
EDP09390 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP09390" - GCIP domain protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP09390GCIP domain protein (151 aa)    
Predicted Functional Partners:
EDP09592
Predicted protein (698 aa)
     
  0.997
XAB2
Transcription-coupled DNA repair protein (886 aa)
     
  0.997
EDP03322
Predicted protein (811 aa)
     
  0.992
PRP19
Spliceosome component, nuclear pre-mRNA splicing factor (503 aa)
     
  0.991
PRP17
Nuclear pre-mRNA splicing factor, component of the spliceosome (313 aa)
     
  0.991
EDP07967
Predicted protein (343 aa)
     
  0.987
EDP06331
Predicted protein (276 aa)
     
  0.987
EDP05779
Predicted protein (150 aa)
     
  0.982
EFG2
Elongation factor 2 (845 aa)
       
  0.974
FAP111
Flagellar associated protein (263 aa)
     
  0.963
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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