STRINGSTRING
EDP09394 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP09394" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP09394Predicted protein (231 aa)    
Predicted Functional Partners:
EDP04765
Predicted protein (266 aa)
     
  0.932
EIF4G
Eukaryotic initiation factor (797 aa)
     
  0.932
MGO1
Mago nashi-like protein (148 aa)
     
  0.908
EDP05185
Eukaryotic initiation factor 4A-like protein (413 aa)
     
 
  0.898
RBM8A
RNA binding motif protein (144 aa)
     
  0.864
PNP1
Polyribonucleotide phosphorylase PNPase (599 aa)
   
 
  0.781
REF1
RNA export factor (137 aa)
     
  0.753
RPL7
Ribosomal protein L7 (266 aa)
     
  0.752
CWC22
Cwc22 pre-mRNA splicing factor (592 aa)
     
  0.747
RPL5
Ribosomal protein L5 (293 aa)
     
  0.738
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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