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SDC1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"SDC1" - Serine decarboxylase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC1Serine decarboxylase (375 aa)    
Predicted Functional Partners:
AMX3
Copper amine oxidase, amiloride-sensitive (846 aa)
     
 
    0.930
DDC1
Aromatic-aminoacid decarboxylase (474 aa)
   
   
  0.903
EDP09078
Predicted protein (440 aa)
       
    0.900
HDH1
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine (462 aa)
         
    0.900
ADH1
Dual function alcohol dehydrogenase / acetaldehyde dehydrogenase (954 aa)
     
  0.768
EDP00830
4-aminobutyrate aminotransferase (425 aa)
   
  0.767
AGT3
Alanine-glyoxylate aminotransferase (514 aa)
   
  0.767
AGT2
Alanine-glyoxylate transaminase (488 aa)
   
  0.767
EDO98866
Predicted protein (476 aa)
     
  0.753
EDP02683
Predicted protein (466 aa)
   
   
  0.552
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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