STRINGSTRING
RB47 protein (Chlamydomonas reinhardtii) - STRING interaction network
"RB47" - Polyadenylate-binding protein RB47 in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB47Polyadenylate-binding protein RB47; Binds the poly(A) tail of mRNA (636 aa)    
Predicted Functional Partners:
EFG3
Elongation factor-like protein (428 aa)
     
  0.987
EIF4E
Eukaryotic initiation factor (202 aa)
     
  0.978
EDP04765
Predicted protein (266 aa)
     
  0.961
EIF4G
Eukaryotic initiation factor (797 aa)
     
  0.961
EDP08434
poly(A) binding protein (136 aa)
     
  0.944
EDP04789
Predicted protein (1372 aa)
     
 
  0.934
EDP04639
Predicted protein (2497 aa)
     
 
  0.934
EDO98399
Predicted protein (1238 aa)
     
 
  0.934
EDO98311
Predicted protein (1716 aa)
     
 
  0.934
EDO99837
RNA binding protein (316 aa)
     
0.919
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
Server load: low (9%) [HD]