STRINGSTRING
EDP09447 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP09447" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP09447Predicted protein (142 aa)    
Predicted Functional Partners:
EDP00526
Predicted protein (338 aa)
       
 
  0.968
EDP05775
RuvB-like helicase; Belongs to the RuvB family (465 aa)
     
 
  0.932
EDP08954
Histone H2A (144 aa)
     
 
  0.931
EDP00834
RuvB-like helicase; Belongs to the RuvB family (455 aa)
     
 
  0.927
EDP10032
Predicted protein (120 aa)
       
 
  0.923
EDP10031
Predicted protein (116 aa)
       
 
  0.923
EDP01523
Predicted protein (366 aa)
     
 
  0.893
TF2F
Transcription factor IIF (206 aa)
     
 
  0.875
EDP09492
Predicted protein (369 aa)
           
  0.847
ARP4
Actin-related protein ; Belongs to the actin family (458 aa)
       
 
  0.761
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
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