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EDP09470 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP09470" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP09470Predicted protein (198 aa)    
Predicted Functional Partners:
DUR1
Urea carboxylase (1251 aa)
   
   
  0.592
EDP00845
Predicted protein (428 aa)
     
 
  0.589
EDP06926
Predicted protein (796 aa)
   
 
  0.543
MAP1A
Methionine aminopeptidase (383 aa)
   
   
  0.534
MAP1D
Methionine aminopeptidase (337 aa)
   
   
  0.534
MAP2
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val) (510 aa)
   
   
  0.534
EDO98981
Predicted protein (387 aa)
   
   
  0.534
EDO97086
Predicted protein (156 aa)
     
   
  0.534
GSN1
Glutamate synthase, NADH-dependent (2201 aa)
   
   
  0.522
UBQ6
Ubiquitin fusion protein (805 aa)
     
 
  0.521
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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