STRINGSTRING
EDP09477 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP09477" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP09477Predicted protein (422 aa)    
Predicted Functional Partners:
EDP09826
Predicted protein (478 aa)
     
        0.542
EDP03464
Predicted protein (477 aa)
     
        0.520
EDP04177
Predicted protein (193 aa)
     
        0.515
SCC3
Cohesin complex subunit (1259 aa)
     
        0.513
EDP09999
Predicted protein (424 aa)
     
        0.508
EDO98749
Predicted protein (258 aa)
     
        0.505
EDP04827
Predicted protein (2304 aa)
     
        0.503
SMC1
Structural maintenance of chromosomes protein 1 (818 aa)
     
        0.503
MLH1
Mismatch repair protein (1007 aa)
     
        0.499
EDP04537
Predicted protein (739 aa)
     
        0.477
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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