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EDP09502 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP09502" - Collagen-like protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP09502Collagen-like protein (450 aa)    
Predicted Functional Partners:
MINE1
Chloroplast division site-determinant MinE (208 aa)
     
        0.714
EDP00281
Predicted protein (609 aa)
     
        0.710
CDC20
Activator and specificity subunit of anaphase promoting complex (477 aa)
     
        0.706
EDP02526
Predicted protein (1958 aa)
     
        0.700
EDP08517
Predicted protein (272 aa)
     
        0.699
EDO95852
Hypothetical protein (272 aa)
     
        0.699
EDP01590
Predicted protein (909 aa)
     
        0.698
POC1
Centriole proteome protein (393 aa)
     
        0.695
EDP01308
Predicted protein (369 aa)
     
        0.688
POC11
Centriole proteome protein (451 aa)
     
        0.687
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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