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EDP09595 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP09595" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP09595Predicted protein (378 aa)    
Predicted Functional Partners:
SMP12
U1 small nuclear ribonucleoprotein (394 aa)
     
 
  0.968
PRP17
Nuclear pre-mRNA splicing factor, component of the spliceosome (313 aa)
     
      0.964
PRP19
Spliceosome component, nuclear pre-mRNA splicing factor (503 aa)
     
 
  0.962
EDO97595
Nuclear pre-mRNA splicing factor, component of splicing factor 3b (1078 aa)
     
 
  0.938
SMP4
Small nuclear ribonucleoprotein Sm D2 (110 aa)
       
 
  0.933
SMP1
Small nuclear ribonucleoprotein (127 aa)
       
 
  0.933
SMP9
Small nuclear ribonucleoprotein Sm D1 (114 aa)
       
 
  0.928
WWP1
WW domain protein (746 aa)
     
 
  0.928
EDP02708
Predicted protein (104 aa)
     
 
  0.922
PRP39
Nuclear pre-mRNA splicing factor and U1 snRNP component (476 aa)
     
 
  0.912
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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