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EDP09607 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP09607" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP09607Predicted protein (251 aa)    
Predicted Functional Partners:
EDP01506
Predicted protein (345 aa)
     
      0.688
EDO98322
cysteinyl-tRNA synthetase (637 aa)
   
      0.567
HYDEF
Iron hydrogenase assembly protein (1151 aa)
              0.525
AST5
Aspartate aminotransferase (379 aa)
   
 
    0.496
EDO98937
Predicted protein (492 aa)
     
      0.489
EDP06655
Predicted protein (64 aa)
   
   
  0.464
CCB3
CPLD43 protein required for cyt b6 assembly (193 aa)
   
   
  0.460
EDP09536
Predicted protein (619 aa)
              0.447
EDP09534
Predicted protein (702 aa)
              0.447
EDP06006
Predicted protein (665 aa)
   
      0.443
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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