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PRA1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"PRA1" - Prenylated rab acceptor family protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRA1Prenylated rab acceptor family protein (203 aa)    
Predicted Functional Partners:
EDO96967
Eukaryotic translation elongation factor 1 alpha 2 (463 aa)
           
  0.807
EEF1
Eukaryotic translation elongation factor 1 alpha 1 (463 aa)
           
  0.804
RABD1
Small rab-related GTPase (203 aa)
       
 
  0.787
CGL60
Predicted protein (457 aa)
     
      0.667
RABF1
Small rab-related GTPase (202 aa)
       
 
  0.633
SYP5
Qc-SNARE protein, Syn8/Syntaxin8-family (243 aa)
       
      0.618
SYP6
Qc-SNARE protein, Tlg1/Syntaxin 6-family (225 aa)
       
      0.618
VPS60
Subunit of the ESCRT-III complex (166 aa)
     
        0.550
EDP00302
Predicted protein (341 aa)
     
        0.524
EDO97652
Predicted protein (533 aa)
     
        0.521
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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