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PDE4 protein (Chlamydomonas reinhardtii) - STRING interaction network
"PDE4" - 3',5'-cyclic-nucleotide phosphodiesterase in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDE43’,5’-cyclic-nucleotide phosphodiesterase (305 aa)    
Predicted Functional Partners:
EDP04479
Predicted protein (823 aa)
     
 
    0.905
ADK6
Adenylate kinase 6 (235 aa)
         
  0.903
ADK3
Adenylate kinase 3 (264 aa)
         
  0.903
ADK4
Adenylate kinase 4 (221 aa)
         
  0.903
FAK1
ODA5-associated flagellar adenylate kinase (657 aa)
     
 
  0.903
EDP03596
Predicted protein (592 aa)
     
 
    0.903
EDO96757
Predicted protein (471 aa)
     
 
    0.902
EDP08934
Predicted protein (130 aa)
         
  0.900
EDP08173
Predicted protein (456 aa)
         
    0.900
EDP06668
Predicted protein; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Has also ATPase activity (182 aa)
         
    0.900
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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