STRINGSTRING
EDP09654 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP09654" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP09654Predicted protein (445 aa)    
Predicted Functional Partners:
RAD17
DNA damage checkpoint protein (1026 aa)
     
        0.507
EDP03231
Predicted protein (1072 aa)
     
        0.445
EDP02584
Predicted protein (259 aa)
     
        0.410
EDP04861
Predicted protein (431 aa)
     
        0.408
EDP07268
Amine oxidase family protein (407 aa)
     
        0.406
EIF3Z
Eukaryotic initiation factor (201 aa)
     
        0.406
EDO98194
Predicted protein (358 aa)
     
        0.405
EDP08752
Predicted protein (366 aa)
     
        0.403
RAT2
Chloroplast tscA maturation factor (567 aa)
     
        0.402
EDP03928
Predicted protein (394 aa)
     
        0.400
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
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