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EDP09691 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP09691" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP09691Predicted protein (513 aa)    
Predicted Functional Partners:
EDO98837
Predicted protein (475 aa)
     
 
  0.983
EDO99339
WD40 repeat protein (339 aa)
     
        0.678
EDP01841
Sin3 complex component (136 aa)
     
      0.635
PRP19
Spliceosome component, nuclear pre-mRNA splicing factor (503 aa)
   
        0.588
EDP08353
U5 snRNP-specific protein (330 aa)
   
     
0.588
PRP4
Splicing factor, component of the U4/U6-U5 snRNP complex (350 aa)
 
     
0.584
PGD1
D-3-phosphoglycerate dehydrogenase (587 aa)
     
      0.570
MKP5
MAP kinase phosphatase 5 (468 aa)
     
        0.538
EDP09682
Predicted protein (269 aa)
     
      0.536
EDP05271
RNA processing protein (511 aa)
     
        0.535
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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