STRINGSTRING
EDP09706 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP09706" - Beta-ureidopropionase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP09706Beta-ureidopropionase (393 aa)    
Predicted Functional Partners:
EDP07748
Predicted protein (219 aa)
 
 
  0.971
TBA1
psbA translation factor (431 aa)
   
 
  0.932
AGT2
Alanine-glyoxylate transaminase (488 aa)
   
 
  0.913
EDP09078
Predicted protein (440 aa)
   
  0.912
EDP05401
Aldehyde dehydrogenase (536 aa)
   
 
  0.910
PANC
Pantothenate synthetase (199 aa)
         
  0.902
EDP09111
Predicted protein (160 aa)
   
  0.828
AIH2
Agmatine iminohydrolase (421 aa)
   
  0.723
AIH1
Agmatine iminohydrolase (540 aa)
   
  0.706
EDP03718
Predicted protein (234 aa)
       
  0.684
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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