STRINGSTRING
AGA1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"AGA1" - Alpha-galactosidase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA1Alpha-galactosidase (328 aa)    
Predicted Functional Partners:
EDP02788
Predicted protein (1000 aa)
   
   
  0.924
AGL1
Alpha glucosidase (1059 aa)
       
  0.905
AEP1
Aldose-1-epimerase; Converts alpha-aldose to the beta-anomer (388 aa)
     
 
    0.903
EDP05544
Predicted protein (309 aa)
         
  0.901
EDP09106
Predicted protein (377 aa)
         
    0.900
SIP1
Raffinose synthase (898 aa)
         
    0.900
EDP06232
Predicted protein (226 aa)
 
        0.543
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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