STRINGSTRING
EDP09753 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP09753" - Ubiquitin conjugating enzyme E2 in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP09753Ubiquitin conjugating enzyme E2 (196 aa)    
Predicted Functional Partners:
UBC1
Ubiquitin activating enzyme E1 (411 aa)
     
  0.753
UBA1
Ubiquitin-activating enzyme E1 (1061 aa)
     
  0.703
APG7
Autophagy protein (605 aa)
     
  0.651
EDO98683
Predicted protein (178 aa)
     
  0.630
EDP02932
Predicted protein (185 aa)
       
      0.626
EDP02031
Predicted protein (199 aa)
       
      0.626
EDO97426
Predicted protein (168 aa)
       
      0.626
EDP09075
Predicted protein (329 aa)
     
  0.620
EDP00636
Predicted protein (969 aa)
     
    0.620
APG8
Autophagy protein (134 aa)
     
        0.606
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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