STRINGSTRING
DDC1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"DDC1" - Aromatic-aminoacid decarboxylase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDC1Aromatic-aminoacid decarboxylase (474 aa)    
Predicted Functional Partners:
AMX3
Copper amine oxidase, amiloride-sensitive (846 aa)
         
  0.931
AMX1
Copper amine oxidase (615 aa)
         
  0.931
AMX2
Copper amine oxidase (619 aa)
         
  0.931
AST3
Aspartate aminotransferase (428 aa)
     
 
  0.909
EDP02047
Predicted protein (434 aa)
       
  0.905
AST4
Aspartate aminotransferase (399 aa)
         
  0.905
AST1
Aspartate aminotransferase (433 aa)
         
  0.905
EDP08049
Predicted protein (470 aa)
     
 
    0.903
SDC1
Serine decarboxylase (375 aa)
   
   
  0.903
HIS5
Histidinol phosphate aminotransferase (373 aa)
   
 
    0.902
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
Server load: low (4%) [HD]