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VPS35 protein (Chlamydomonas reinhardtii) - STRING interaction network
"VPS35" - Subunit of retromer complex in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS35Subunit of retromer complex (739 aa)    
Predicted Functional Partners:
VPS29
Subunit of retromer complex (188 aa)
     
  0.998
VPS26
Subunit of retromer complex (320 aa)
     
  0.997
VPS5C
Subunit of retromer complex (747 aa)
     
  0.976
VPS5A
Subunit of retromer complex (410 aa)
     
  0.970
EDP07916
Predicted protein (411 aa)
     
  0.933
EDO99832
Predicted protein (592 aa)
     
 
  0.914
RABH1
Small rab-related GTPase (211 aa)
     
 
  0.830
VPS36
Subunit of ESCRT-II complex (701 aa)
     
 
  0.825
VSR1
Vacuolar sorting receptor (700 aa)
     
   
  0.824
COG6
Component of oligomeric golgi complex 6 (681 aa)
     
 
  0.815
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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