STRINGSTRING
EDP09803 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP09803" - Transducin-like protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP09803Transducin-like protein (494 aa)    
Predicted Functional Partners:
DDB1
UV-damaged DNA binding complex subunit 1 protein (1147 aa)
       
  0.979
CSN5
COP signalosome subunit 5 (326 aa)
       
  0.828
EDP10005
Predicted protein (280 aa)
         
    0.800
EDP06305
Predicted protein (119 aa)
     
 
  0.754
EDP08198
SNF2/RAD54 family protein (1877 aa)
       
  0.747
EDO96781
SWI/SNF chromatin remodeling complex component (962 aa)
       
  0.747
CUL2
Cullin (782 aa)
       
  0.731
TF2H2
Transcription factor TFIIH, 44 kDa subunit (413 aa)
       
  0.724
XAB2
Transcription-coupled DNA repair protein (886 aa)
       
  0.719
EDP04821
Predicted protein (341 aa)
     
 
  0.716
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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