• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
EDP09829 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP09829" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP09829Predicted protein (747 aa)    
Predicted Functional Partners:
EDP00886
Predicted protein (393 aa)
     
 
  0.970
EDO97765
Predicted protein (641 aa)
     
   
  0.857
EDP03322
Predicted protein (811 aa)
     
      0.764
EDO97327
Predicted protein (403 aa)
     
      0.744
EDO97326
Predicted protein (246 aa)
     
      0.724
EDP01506
Predicted protein; Belongs to the class-I aminoacyl-tRNA synthetase family (345 aa)
     
        0.709
EIF3B
Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (718 aa)
     
 
  0.695
EIF5Bd
Eukaryotic initiation factor (170 aa)
     
   
  0.643
EDO98978
Predicted protein (322 aa)
     
   
  0.574
EDP06881
Predicted protein (674 aa)
           
  0.569
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
Server load: low (16%) [HD]