STRINGSTRING
EDP09842 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP09842" - Calcium-transporting ATPase in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP09842Calcium-transporting ATPase (375 aa)    
Predicted Functional Partners:
EDO98549
Predicted protein (286 aa)
 
 
  0.972
EDO95970
Calcium-transporting ATPase 2 (141 aa)
 
 
  0.810
EDP01056
Predicted protein (159 aa)
     
 
  0.675
EDO96652
Predicted protein (181 aa)
     
 
  0.675
EDP10024
Predicted protein (272 aa)
     
 
  0.657
DLC4
Flagellar outer dynein arm 18 kDa light chain LC4 (159 aa)
     
 
  0.657
CAM1
Calmodulin (163 aa)
     
 
  0.657
FAP272
Flagellar associated protein, calmodulin-like protein (154 aa)
     
 
  0.657
FAP290
Flagellar associated protein (339 aa)
     
 
  0.657
EDP03232
EF-Hand domain-containing thioredoxin (358 aa)
     
 
  0.657
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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