STRINGSTRING
EDP09845 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP09845" - N6-DNA-methyltransferase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP09845N6-DNA-methyltransferase (223 aa)    
Predicted Functional Partners:
EDP05523
Predicted protein (132 aa)
       
  0.969
PRFA2
Hypothetical protein (336 aa)
   
 
  0.935
PRFA1
Peptide chain release factor (383 aa)
   
 
  0.935
ERF1
Eukaryotic release factor 1 (438 aa)
     
  0.755
EDP09441
Dimethyladenosine transferase (352 aa)
 
   
  0.635
EFG3
Elongation factor-like protein (428 aa)
         
  0.569
AHD1
Bifunctional aspartate kinase/homoserine dehydrogenase (917 aa)
         
  0.561
EDP08757
Predicted protein (399 aa)
              0.540
EDP04387
Predicted protein (399 aa)
              0.540
EDP01591
Predicted protein (71 aa)
       
      0.480
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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