STRINGSTRING
EDP09861 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP09861" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP09861Predicted protein (118 aa)    
Predicted Functional Partners:
RSZ22
SR protein factor (200 aa)
     
 
  0.983
SCL27
SR protein factor (286 aa)
   
 
0.944
EDP09012
Predicted protein (86 aa)
   
 
0.941
EDP01159
Predicted protein (170 aa)
       
 
  0.915
EDP00640
Predicted protein (169 aa)
       
 
  0.915
SRP35
SR protein factor (338 aa)
     
 
  0.886
SRP36
SR protein factor (320 aa)
     
 
  0.884
SCL26
SR protein factor (224 aa)
       
 
  0.701
SMP12
U1 small nuclear ribonucleoprotein (394 aa)
       
 
0.431
EDO99837
RNA binding protein (316 aa)
       
 
  0.401
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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