STRINGSTRING
EDP09871 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP09871" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP09871Predicted protein (1378 aa)    
Predicted Functional Partners:
EDP03953
Predicted protein (504 aa)
     
        0.687
MLH1
Mismatch repair protein (1007 aa)
     
        0.674
EDP04516
SWI/SNF chromatin remodeling complex component (845 aa)
     
        0.665
EDP03175
Histone methyltransferase (1708 aa)
     
        0.665
EDP05522
Predicted protein (1017 aa)
     
        0.664
EDP04084
Predicted protein (1377 aa)
     
        0.664
EDP02859
Predicted protein (320 aa)
     
        0.664
EDP02506
ATP-dependent DNA helicase (897 aa)
     
        0.664
EDP00964
Predicted protein (1253 aa)
     
        0.662
EDP08895
Predicted protein (277 aa)
     
        0.661
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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