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TPK1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"TPK1" - Thiamine pyrophosphokinase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPK1Thiamine pyrophosphokinase (267 aa)    
Predicted Functional Partners:
EDP04550
Predicted protein (178 aa)
         
    0.900
BIOF
7-keto-8-aminopelargonic acid synthase (328 aa)
     
   
  0.814
BIOA
Diaminopelargonic acid synthase (819 aa)
           
  0.810
EDP09414
Predicted protein (384 aa)
     
        0.653
CPLD35
Oxidoreductase-like protein (479 aa)
 
            0.635
TRK1
Transketolase (718 aa)
           
  0.604
TOP2
DNA topoisomerase II; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1167 aa)
              0.508
EDP05659
Predicted protein (308 aa)
       
    0.502
METE
Cobalamin-independent methionine synthase (815 aa)
     
   
  0.490
ERG26
C-3 sterol dehydrogenase/C-4 decarboxylase (465 aa)
     
   
  0.489
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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