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EDP09880 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP09880" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP09880Predicted protein (288 aa)    
Predicted Functional Partners:
EDP08513
Predicted protein (1198 aa)
     
        0.519
SMG1
Phosphatidylinositol 3-kinase-related protein kinase (4881 aa)
     
        0.504
EDP08005
Predicted protein (3780 aa)
     
        0.479
EDP05786
Predicted protein (751 aa)
     
        0.479
EDP00601
FAB-like protein, FYVE-domain PI-3,4-kinase (1269 aa)
     
        0.475
PWD1
Phosphoglucan water dikinase (978 aa)
     
        0.475
EDO97302
Histone methyltransferase (2487 aa)
     
        0.475
EDO96522
Predicted protein (3102 aa)
     
        0.475
EDO96419
Predicted protein (189 aa)
     
        0.475
EDO98443
Predicted protein (1224 aa)
     
        0.429
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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