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EDP09902 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP09902" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP09902Predicted protein (319 aa)    
Predicted Functional Partners:
EDP08819
Predicted protein (148 aa)
     
 
  0.931
EDP01912
Hypothetical protein (269 aa)
     
 
  0.925
TLA1
Predicted protein (213 aa)
     
 
  0.912
EDP05167
Predicted protein (1378 aa)
     
        0.523
EFG5
Elongation factor EF-Tu-like protein (989 aa)
     
        0.516
EDO97595
Nuclear pre-mRNA splicing factor, component of splicing factor 3b (1078 aa)
     
        0.502
EDP00100
Predicted protein (515 aa)
     
        0.493
EDO98549
Predicted protein (286 aa)
     
      0.486
EDP02188
Histone deacetylase (419 aa)
     
        0.476
EDP09315
High mobility group protein (552 aa)
     
        0.475
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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