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EDP09942 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP09942" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP09942Predicted protein (621 aa)    
Predicted Functional Partners:
UBC8
Ubiquitin-protein ligase (1258 aa)
     
        0.521
EDO97682
Predicted protein (408 aa)
     
     
0.516
EDP00435
Predicted protein (817 aa)
     
        0.513
EDO98443
Predicted protein (1224 aa)
     
        0.500
EDP03957
Predicted protein (625 aa)
     
        0.475
MRP6-3
ABC transporter, multidrug resistance associated protein (428 aa)
     
        0.475
EDP01031
Predicted protein (292 aa)
     
        0.475
EDP00038
Predicted protein (860 aa)
     
        0.475
BOR1
Borate transporter (497 aa)
     
        0.449
MRP6-5
ABC transporter, multidrug resistance associated protein (295 aa)
     
        0.431
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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