STRINGSTRING
EDP09946 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP09946" - Speract/scavenger receptor, transmembrane glycoprotein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP09946Speract/scavenger receptor, transmembrane glycoprotein (1090 aa)    
Predicted Functional Partners:
MTP5
CDF transporter, membrane protein (472 aa)
     
        0.556
EDP05894
Predicted protein (410 aa)
     
        0.508
EDP00715
Predicted protein (814 aa)
     
        0.503
MTA4
Predicted protein (880 aa)
     
        0.501
EDO97213
Predicted protein (748 aa)
     
        0.501
EDP04662
Predicted protein (596 aa)
     
        0.480
UBC8
Ubiquitin-protein ligase (1258 aa)
     
        0.477
EDP07227
Predicted protein (231 aa)
     
        0.475
EDP03957
Predicted protein (625 aa)
     
        0.475
EDO99891
SNF2 superfamily protein (876 aa)
     
        0.475
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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