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EDP09947 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP09947" - PfkB-type carbohydrate kinase in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP09947PfkB-type carbohydrate kinase (345 aa)    
Predicted Functional Partners:
EDP07176
Predicted protein (856 aa)
     
        0.658
EDO96402
Predicted protein (502 aa)
     
        0.647
EDO98304
Predicted protein (331 aa)
     
        0.597
EDP00054
Predicted protein (296 aa)
     
        0.542
EDP02093
Predicted protein (952 aa)
     
        0.525
CYG18
Guanylate cyclase (2106 aa)
     
        0.520
EDP05882
Predicted protein (283 aa)
     
        0.512
EDP08804
Predicted protein (1010 aa)
     
        0.507
CPL4
Hypothetical protein (441 aa)
     
        0.507
EDP04470
Predicted protein (879 aa)
     
        0.504
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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