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RABH1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"RABH1" - Small rab-related GTPase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RABH1Small rab-related GTPase (211 aa)    
Predicted Functional Partners:
VPS52
Subunit of GARP complex (657 aa)
     
  0.972
GDIC1
Rab GDP dissociation inhibitor protein (442 aa)
     
 
  0.958
COG3
Component of oligomeric golgi complex 3 (805 aa)
     
 
  0.914
COG8
Component of oligomeric golgi complex 8 (546 aa)
     
  0.893
COG6
Component of oligomeric golgi complex 6 (681 aa)
     
  0.888
ARL1
ARF-like small GTPase (181 aa)
     
  0.866
SEC31
COP-II coat subunit (1313 aa)
     
   
  0.860
RABA1
Small rab-related GTPase (216 aa)
   
0.845
VPS35
Subunit of retromer complex (739 aa)
     
 
  0.830
RABL2A
Small rab-related GTPase (229 aa)
   
0.825
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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