STRINGSTRING
HLA8 protein (Chlamydomonas reinhardtii) - STRING interaction network
"HLA8" - High light-induced nuclease in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HLA8High light-induced nuclease (275 aa)    
Predicted Functional Partners:
GBP1
G-strand telomere binding protein 1 (221 aa)
     
   
  0.721
EDO97414
Short chain dehydrogenase/reductase (277 aa)
         
  0.712
EDO97055
Short-chain dehydrogenase/reductase (426 aa)
         
  0.712
BIP2
Binding protein 2 (662 aa)
     
   
  0.653
EDP06492
Nuclear ribonucleoprotein (356 aa)
     
   
  0.573
GSN1
Glutamate synthase, NADH-dependent (2201 aa)
         
  0.552
GSF1
Ferredoxin-dependent glutamate synthase (1552 aa)
         
  0.548
NAB1
Nucleic acid binding protein (247 aa)
       
 
  0.495
SEC61A
SEC61-alpha subunit of ER-translocon (476 aa)
     
        0.471
SECY1
Preprotein translocase secY subunit (451 aa)
     
        0.471
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
Server load: low (10%) [HD]