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EDP10003 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP10003" - Reverse transcriptase, gag-pol polyprotein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP10003Reverse transcriptase, gag-pol polyprotein (462 aa)    
Predicted Functional Partners:
EDP08108
Predicted protein (209 aa)
     
        0.712
EDP05392
Predicted protein (163 aa)
     
        0.712
DMC1
Rad51-like protein (343 aa)
     
        0.704
EDP07136
Predicted protein (110 aa)
     
        0.701
EDO96290
Predicted protein (97 aa)
     
        0.697
EDP03028
Predicted protein (257 aa)
     
        0.689
EDO99617
Predicted protein (177 aa)
     
        0.687
EDO97106
Predicted protein (169 aa)
     
        0.683
EDP07325
Predicted protein (109 aa)
     
        0.682
EDP09246
Predicted protein (107 aa)
     
        0.676
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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