STRINGSTRING
EDP10027 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP10027" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP10027Predicted protein (768 aa)    
Predicted Functional Partners:
EDO98861
Predicted protein (658 aa)
     
        0.523
EDP06830
Predicted protein (283 aa)
     
        0.476
EDP08306
Protein phosphatase 2A regulatory subunit (373 aa)
     
        0.475
EDO99026
Predicted protein (1081 aa)
     
        0.475
EDP03314
Predicted protein (578 aa)
     
        0.445
AP1M1
Mu1-Adaptin (425 aa)
     
        0.427
CDH1
Activator and specificity factor for anaphase promoting complex (446 aa)
     
        0.427
EDO98409
Predicted protein (265 aa)
     
        0.420
VPS52
Subunit of GARP complex (657 aa)
     
        0.405
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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