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STRINGSTRING
EDP10032 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP10032" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP10032Predicted protein (120 aa)    
Predicted Functional Partners:
EDP09447
Predicted protein (142 aa)
       
 
  0.923
EDP08954
Histone H2A (144 aa)
       
 
  0.922
EDP10031
Predicted protein (116 aa)
 
        0.912
EDP00526
Predicted protein (338 aa)
     
 
  0.909
ARP4
Actin-related protein ; Belongs to the actin family (458 aa)
     
 
  0.904
EDP00834
RuvB-like helicase; Belongs to the RuvB family (455 aa)
     
 
  0.900
EDP01523
Predicted protein (366 aa)
     
 
  0.887
EDP05775
RuvB-like helicase; Belongs to the RuvB family (465 aa)
     
 
  0.886
EDP05744
Predicted protein (1002 aa)
 
 
 
  0.871
EDP06932
ATM/ATR-like kinase ; Belongs to the PI3/PI4-kinase family (4723 aa)
     
 
  0.818
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
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