STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSP23Flagellar radial spoke nucleoside diphosphate kinase; Belongs to the NDK family. (586 aa)    
Predicted Functional Partners:
RSP4
Radial spoke protein 4.
    
 
 0.987
RSP16
Radial spoke protein 16.
    
 
 0.983
RSP2
Uncharacterized protein.
    
 
 0.982
RSP3
Radial spoke protein 3.
  
 
 0.981
RSP9
Radial spoke protein 9.
    
 
 0.978
RSP10
Radial spoke protein 10.
    
 
 0.964
PF25
Radial spoke protein 11.
    
 
 0.956
CYN17
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
 
 0.904
RSP1
Uncharacterized protein.
    
   0.900
RSP14
Uncharacterized protein.
    
 
 0.899
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.