STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFU18060.1Hypothetical protein. (171 aa)    
Predicted Functional Partners:
SFU18054.1
Uncharacterized membrane protein YoaK, UPF0700 family.
 
     0.931
SFU18064.1
Signal transduction histidine kinase.
 
     0.885
SFU18057.1
Hypothetical protein.
       0.782
SFT84193.1
Conserved repeat domain-containing protein.
  
     0.705
SFT84271.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.584
SFU18067.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 
     0.552
SFU03022.1
Putative membrane protein.
 
     0.467
SFT74957.1
HmuY protein.
  
     0.448
SFT66248.1
Tetratricopeptide repeat-containing protein.
  
     0.439
SFT36759.1
Protein of unknown function.
  
     0.425
Your Current Organism:
Algoriphagus locisalis
NCBI taxonomy Id: 305507
Other names: A. locisalis, Algoriphagus locisalis Yoon et al. 2005, DSM 23445, JCM 12597, KCTC 12310, strain MSS-170
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