STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HLA-DQB1Major histocompatibility complex, class II, DQ beta 1. (276 aa)    
Predicted Functional Partners:
HLA-DRA
Major histocompatibility complex, class II, DR alpha; Belongs to the MHC class II family.
   
0.983
LOC100957736
Ig-like domain-containing protein; Belongs to the MHC class II family.
   
0.979
CD74
CD74 molecule.
   
 0.973
HLA-DOA
Major histocompatibility complex, class II, DO alpha; Belongs to the MHC class II family.
   
0.971
HLA-DMA
Major histocompatibility complex, class II, DM alpha; Belongs to the MHC class II family.
   
 0.965
H0Y2E5_OTOGA
Ig-like domain-containing protein.
   
0.959
HLA-DPA1
Major histocompatibility complex, class II, DP alpha 1; Belongs to the MHC class II family.
   
0.956
TRAC
T cell receptor alpha constant.
    
  0.897
RPS14
Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.
   
 0.887
H0XXW2_OTOGA
Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.
   
 0.887
Your Current Organism:
Otolemur garnettii
NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.