STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACE1Beta-secretase 1; Belongs to the peptidase A1 family. (501 aa)    
Predicted Functional Partners:
H0WLC2_OTOGA
Reticulon.
   
 0.945
RTN3
Reticulon.
   
 0.936
GGA1
Golgi associated, gamma adaptin ear containing, ARF binding protein 1.
    
 0.935
APLP2
Amyloid beta precursor like protein 2.
    
 0.870
RTN2
Reticulon.
   
 0.864
BACE2
Beta-secretase 2; Belongs to the peptidase A1 family.
  
  
 
0.833
APLP1
Amyloid beta precursor like protein 1.
    
 0.832
GGA2
Golgi associated, gamma adaptin ear containing, ARF binding protein 2.
    
 0.790
H0XHM9_OTOGA
Reticulon.
   
 0.762
H0XRH8_OTOGA
Uncharacterized protein.
   
 0.762
Your Current Organism:
Otolemur garnettii
NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago
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