STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAP1Transporter 1, ATP binding cassette subfamily B member. (741 aa)    
Predicted Functional Partners:
H0X9W4_OTOGA
Uncharacterized protein.
  
0.999
H0XSU5_OTOGA
Uncharacterized protein.
  
0.998
TAPBP
TAP binding protein.
   
 0.989
PDIA3
Protein disulfide-isomerase.
   
 0.961
PSMB9
Proteasome subunit beta.
 
 
 0.961
PSMB8
Proteasome subunit beta.
 
 
 0.928
CALR
Calreticulin.
   
 0.899
H0XWF5_OTOGA
Calreticulin.
   
 0.849
IRF1
Interferon regulatory factor.
   
  
 0.800
STAT1
Signal transducer and activator of transcription.
   
  
 0.788
Your Current Organism:
Otolemur garnettii
NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago
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