Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GLCE | GPC1 | ENSOGAP00000020179 | ENSOGAP00000001499 | Glucuronic acid epimerase. | Glypican 1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | 0.461 |
GLCE | GPC4 | ENSOGAP00000020179 | ENSOGAP00000006286 | Glucuronic acid epimerase. | Glypican 4; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | 0.461 |
GLCE | H0WXR0_OTOGA | ENSOGAP00000020179 | ENSOGAP00000007261 | Glucuronic acid epimerase. | Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | 0.461 |
GLCE | NDST1 | ENSOGAP00000020179 | ENSOGAP00000009913 | Glucuronic acid epimerase. | N-deacetylase and N-sulfotransferase 1. | 0.907 |
GLCE | NDST2 | ENSOGAP00000020179 | ENSOGAP00000015414 | Glucuronic acid epimerase. | Uncharacterized protein. | 0.926 |
GLCE | NDST3 | ENSOGAP00000020179 | ENSOGAP00000015136 | Glucuronic acid epimerase. | N-deacetylase and N-sulfotransferase 3. | 0.916 |
GLCE | NDST4 | ENSOGAP00000020179 | ENSOGAP00000015302 | Glucuronic acid epimerase. | N-deacetylase and N-sulfotransferase 4. | 0.907 |
GLCE | SDC2 | ENSOGAP00000020179 | ENSOGAP00000013318 | Glucuronic acid epimerase. | Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. | 0.632 |
GPC1 | GLCE | ENSOGAP00000001499 | ENSOGAP00000020179 | Glypican 1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | Glucuronic acid epimerase. | 0.461 |
GPC1 | GPC3 | ENSOGAP00000001499 | ENSOGAP00000006689 | Glypican 1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | 0.601 |
GPC1 | H0XV47_OTOGA | ENSOGAP00000001499 | ENSOGAP00000019989 | Glypican 1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | 0.601 |
GPC1 | NDST1 | ENSOGAP00000001499 | ENSOGAP00000009913 | Glypican 1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | N-deacetylase and N-sulfotransferase 1. | 0.543 |
GPC1 | NDST2 | ENSOGAP00000001499 | ENSOGAP00000015414 | Glypican 1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | Uncharacterized protein. | 0.581 |
GPC1 | NDST3 | ENSOGAP00000001499 | ENSOGAP00000015136 | Glypican 1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | N-deacetylase and N-sulfotransferase 3. | 0.555 |
GPC1 | NDST4 | ENSOGAP00000001499 | ENSOGAP00000015302 | Glypican 1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | N-deacetylase and N-sulfotransferase 4. | 0.543 |
GPC1 | SDC2 | ENSOGAP00000001499 | ENSOGAP00000013318 | Glypican 1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. | 0.933 |
GPC3 | GPC1 | ENSOGAP00000006689 | ENSOGAP00000001499 | Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | Glypican 1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | 0.601 |
GPC3 | GPC4 | ENSOGAP00000006689 | ENSOGAP00000006286 | Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | Glypican 4; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | 0.618 |
GPC3 | H0WXR0_OTOGA | ENSOGAP00000006689 | ENSOGAP00000007261 | Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | 0.597 |
GPC3 | H0XV47_OTOGA | ENSOGAP00000006689 | ENSOGAP00000019989 | Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. | 0.897 |
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