Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ASCL5 | BHLHA9 | ENSOGAP00000018672 | ENSOGAP00000017175 | Achaete-scute family bHLH transcription factor 5. | Basic helix-loop-helix family member a9. | 0.538 |
ASCL5 | H0XJ44_OTOGA | ENSOGAP00000018672 | ENSOGAP00000016134 | Achaete-scute family bHLH transcription factor 5. | Uncharacterized protein. | 0.582 |
ASCL5 | LDB1 | ENSOGAP00000018672 | ENSOGAP00000014633 | Achaete-scute family bHLH transcription factor 5. | LIM domain binding 1. | 0.629 |
ASCL5 | LDB2 | ENSOGAP00000018672 | ENSOGAP00000002195 | Achaete-scute family bHLH transcription factor 5. | LIM domain binding 2. | 0.629 |
ASCL5 | RUNX1 | ENSOGAP00000018672 | ENSOGAP00000020115 | Achaete-scute family bHLH transcription factor 5. | Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. | 0.501 |
ASCL5 | RUNX2 | ENSOGAP00000018672 | ENSOGAP00000003469 | Achaete-scute family bHLH transcription factor 5. | Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. | 0.501 |
ASCL5 | RUNX3 | ENSOGAP00000018672 | ENSOGAP00000020044 | Achaete-scute family bHLH transcription factor 5. | Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. | 0.501 |
ASCL5 | TCF12 | ENSOGAP00000018672 | ENSOGAP00000005800 | Achaete-scute family bHLH transcription factor 5. | Transcription factor 12. | 0.765 |
ASCL5 | TCF3 | ENSOGAP00000018672 | ENSOGAP00000003196 | Achaete-scute family bHLH transcription factor 5. | Transcription factor 3. | 0.765 |
ASCL5 | TCF4 | ENSOGAP00000018672 | ENSOGAP00000005129 | Achaete-scute family bHLH transcription factor 5. | Transcription factor 4. | 0.765 |
BHLHA9 | ASCL5 | ENSOGAP00000017175 | ENSOGAP00000018672 | Basic helix-loop-helix family member a9. | Achaete-scute family bHLH transcription factor 5. | 0.538 |
BHLHA9 | H0XJ44_OTOGA | ENSOGAP00000017175 | ENSOGAP00000016134 | Basic helix-loop-helix family member a9. | Uncharacterized protein. | 0.538 |
H0XJ44_OTOGA | ASCL5 | ENSOGAP00000016134 | ENSOGAP00000018672 | Uncharacterized protein. | Achaete-scute family bHLH transcription factor 5. | 0.582 |
H0XJ44_OTOGA | BHLHA9 | ENSOGAP00000016134 | ENSOGAP00000017175 | Uncharacterized protein. | Basic helix-loop-helix family member a9. | 0.538 |
H0XJ44_OTOGA | TCF12 | ENSOGAP00000016134 | ENSOGAP00000005800 | Uncharacterized protein. | Transcription factor 12. | 0.544 |
H0XJ44_OTOGA | TCF3 | ENSOGAP00000016134 | ENSOGAP00000003196 | Uncharacterized protein. | Transcription factor 3. | 0.616 |
H0XJ44_OTOGA | TCF4 | ENSOGAP00000016134 | ENSOGAP00000005129 | Uncharacterized protein. | Transcription factor 4. | 0.544 |
LDB1 | ASCL5 | ENSOGAP00000014633 | ENSOGAP00000018672 | LIM domain binding 1. | Achaete-scute family bHLH transcription factor 5. | 0.629 |
LDB1 | RUNX1 | ENSOGAP00000014633 | ENSOGAP00000020115 | LIM domain binding 1. | Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. | 0.683 |
LDB1 | RUNX2 | ENSOGAP00000014633 | ENSOGAP00000003469 | LIM domain binding 1. | Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. | 0.683 |
page 1 of 4