Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AVPR1A | IRF3 | ENSOGAP00000016878 | ENSOGAP00000010680 | Vasopressin V1a receptor; Receptor for arginine vasopressin. The activity of this receptor is mediated by G proteins which activate a phosphatidyl- inositol-calcium second messenger system. | Interferon regulatory factor 3. | 0.781 |
AVPR1A | MSX2 | ENSOGAP00000016878 | ENSOGAP00000018931 | Vasopressin V1a receptor; Receptor for arginine vasopressin. The activity of this receptor is mediated by G proteins which activate a phosphatidyl- inositol-calcium second messenger system. | Msh homeobox 2. | 0.806 |
DLX5 | MSX2 | ENSOGAP00000021787 | ENSOGAP00000018931 | Distal-less homeobox 5. | Msh homeobox 2. | 0.617 |
DLX5 | RUNX1 | ENSOGAP00000021787 | ENSOGAP00000020115 | Distal-less homeobox 5. | Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. | 0.609 |
DLX5 | RUNX2 | ENSOGAP00000021787 | ENSOGAP00000003469 | Distal-less homeobox 5. | Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. | 0.609 |
DLX5 | RUNX3 | ENSOGAP00000021787 | ENSOGAP00000020044 | Distal-less homeobox 5. | Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. | 0.594 |
H0X9V6_OTOGA | H0XM30_OTOGA | ENSOGAP00000012373 | ENSOGAP00000017170 | Uncharacterized protein. | 5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily. | 0.598 |
H0X9V6_OTOGA | LHX6 | ENSOGAP00000012373 | ENSOGAP00000013518 | Uncharacterized protein. | LIM homeobox 6. | 0.647 |
H0X9V6_OTOGA | MSX2 | ENSOGAP00000012373 | ENSOGAP00000018931 | Uncharacterized protein. | Msh homeobox 2. | 0.920 |
H0X9V6_OTOGA | RUNX1 | ENSOGAP00000012373 | ENSOGAP00000020115 | Uncharacterized protein. | Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. | 0.564 |
H0X9V6_OTOGA | RUNX2 | ENSOGAP00000012373 | ENSOGAP00000003469 | Uncharacterized protein. | Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. | 0.564 |
H0X9V6_OTOGA | RUNX3 | ENSOGAP00000012373 | ENSOGAP00000020044 | Uncharacterized protein. | Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. | 0.560 |
H0X9V6_OTOGA | TTR | ENSOGAP00000012373 | ENSOGAP00000015021 | Uncharacterized protein. | Transthyretin; Thyroid hormone-binding protein. Probably transports thyroxine from the bloodstream to the brain. | 0.609 |
H0XM30_OTOGA | H0X9V6_OTOGA | ENSOGAP00000017170 | ENSOGAP00000012373 | 5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily. | Uncharacterized protein. | 0.598 |
H0XM30_OTOGA | MSX2 | ENSOGAP00000017170 | ENSOGAP00000018931 | 5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily. | Msh homeobox 2. | 0.598 |
IRF3 | AVPR1A | ENSOGAP00000010680 | ENSOGAP00000016878 | Interferon regulatory factor 3. | Vasopressin V1a receptor; Receptor for arginine vasopressin. The activity of this receptor is mediated by G proteins which activate a phosphatidyl- inositol-calcium second messenger system. | 0.781 |
IRF3 | MSX2 | ENSOGAP00000010680 | ENSOGAP00000018931 | Interferon regulatory factor 3. | Msh homeobox 2. | 0.813 |
LHX6 | H0X9V6_OTOGA | ENSOGAP00000013518 | ENSOGAP00000012373 | LIM homeobox 6. | Uncharacterized protein. | 0.647 |
LHX6 | MSX2 | ENSOGAP00000013518 | ENSOGAP00000018931 | LIM homeobox 6. | Msh homeobox 2. | 0.647 |
MSX2 | AVPR1A | ENSOGAP00000018931 | ENSOGAP00000016878 | Msh homeobox 2. | Vasopressin V1a receptor; Receptor for arginine vasopressin. The activity of this receptor is mediated by G proteins which activate a phosphatidyl- inositol-calcium second messenger system. | 0.806 |
page 1 of 3