Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATM | BARD1 | ENSOGAP00000015450 | ENSOGAP00000008142 | Serine-protein kinase ATM; Serine/threonine protein kinase which activates checkpoint signaling upon double strand breaks (DSBs), apoptosis and genotoxic stresses such as ionizing ultraviolet A light (UVA), thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates 'Ser-139' of histone variant H2AX/H2AFX at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Also plays a role in pre-B cell allelic exclusion, a process leading to expression of a single immunoglobulin heavy chain allele to enforce clonality and mo [...] | BRCA1 associated RING domain 1. | 0.996 |
ATM | H0XWF3_OTOGA | ENSOGAP00000015450 | ENSOGAP00000020446 | Serine-protein kinase ATM; Serine/threonine protein kinase which activates checkpoint signaling upon double strand breaks (DSBs), apoptosis and genotoxic stresses such as ionizing ultraviolet A light (UVA), thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates 'Ser-139' of histone variant H2AX/H2AFX at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Also plays a role in pre-B cell allelic exclusion, a process leading to expression of a single immunoglobulin heavy chain allele to enforce clonality and mo [...] | Uncharacterized protein. | 0.629 |
BARD1 | ATM | ENSOGAP00000008142 | ENSOGAP00000015450 | BRCA1 associated RING domain 1. | Serine-protein kinase ATM; Serine/threonine protein kinase which activates checkpoint signaling upon double strand breaks (DSBs), apoptosis and genotoxic stresses such as ionizing ultraviolet A light (UVA), thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates 'Ser-139' of histone variant H2AX/H2AFX at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Also plays a role in pre-B cell allelic exclusion, a process leading to expression of a single immunoglobulin heavy chain allele to enforce clonality and mo [...] | 0.996 |
BARD1 | H0XWF3_OTOGA | ENSOGAP00000008142 | ENSOGAP00000020446 | BRCA1 associated RING domain 1. | Uncharacterized protein. | 0.487 |
DAP3 | H0XWF3_OTOGA | ENSOGAP00000000752 | ENSOGAP00000020446 | Death associated protein 3. | Uncharacterized protein. | 0.469 |
DAP3 | MRPS11 | ENSOGAP00000000752 | ENSOGAP00000004236 | Death associated protein 3. | Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family. | 0.999 |
DAP3 | NME8 | ENSOGAP00000000752 | ENSOGAP00000005072 | Death associated protein 3. | NME/NM23 family member 8. | 0.868 |
DYNLL1 | DYNLL2 | ENSOGAP00000020833 | ENSOGAP00000019093 | Dynein light chain. | Dynein light chain. | 0.979 |
DYNLL1 | H0XWF3_OTOGA | ENSOGAP00000020833 | ENSOGAP00000020446 | Dynein light chain. | Uncharacterized protein. | 0.585 |
DYNLL1 | NME8 | ENSOGAP00000020833 | ENSOGAP00000005072 | Dynein light chain. | NME/NM23 family member 8. | 0.829 |
DYNLL2 | DYNLL1 | ENSOGAP00000019093 | ENSOGAP00000020833 | Dynein light chain. | Dynein light chain. | 0.979 |
DYNLL2 | H0XWF3_OTOGA | ENSOGAP00000019093 | ENSOGAP00000020446 | Dynein light chain. | Uncharacterized protein. | 0.550 |
DYNLL2 | LAMTOR2 | ENSOGAP00000019093 | ENSOGAP00000015177 | Dynein light chain. | Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2. | 0.440 |
DYNLL2 | NME8 | ENSOGAP00000019093 | ENSOGAP00000005072 | Dynein light chain. | NME/NM23 family member 8. | 0.829 |
H0WY93_OTOGA | H0XDF7_OTOGA | ENSOGAP00000007465 | ENSOGAP00000013900 | Uncharacterized protein. | Uncharacterized protein. | 0.991 |
H0WY93_OTOGA | H0XWF3_OTOGA | ENSOGAP00000007465 | ENSOGAP00000020446 | Uncharacterized protein. | Uncharacterized protein. | 0.477 |
H0WY93_OTOGA | MRPS11 | ENSOGAP00000007465 | ENSOGAP00000004236 | Uncharacterized protein. | Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family. | 0.597 |
H0WY93_OTOGA | NME8 | ENSOGAP00000007465 | ENSOGAP00000005072 | Uncharacterized protein. | NME/NM23 family member 8. | 0.938 |
H0XDF7_OTOGA | H0WY93_OTOGA | ENSOGAP00000013900 | ENSOGAP00000007465 | Uncharacterized protein. | Uncharacterized protein. | 0.991 |
H0XDF7_OTOGA | H0XWF3_OTOGA | ENSOGAP00000013900 | ENSOGAP00000020446 | Uncharacterized protein. | Uncharacterized protein. | 0.477 |
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