STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SP140SP140 nuclear body protein. (823 aa)    
Predicted Functional Partners:
UBE2I
Ubiquitin conjugating enzyme E2 I; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.731
CBX5
Chromobox 5.
    
 
 0.668
SUMO1
Ubiquitin-like domain-containing protein.
    
 0.647
H0Y0J5_OTOGA
Small ubiquitin-related modifier.
    
 0.647
PML
Promyelocytic leukemia.
   
 
 0.604
GAS7
Growth arrest specific 7.
    
  0.527
ZFAND4
Zinc finger AN1-type containing 4.
    
 0.501
SUMO3
Small ubiquitin-related modifier.
    
 0.490
H0XQT3_OTOGA
Small ubiquitin-related modifier.
    
 0.490
CBX1
Chromobox 1.
    
 
 0.481
Your Current Organism:
Otolemur garnettii
NCBI taxonomy Id: 30611
Other names: Galago garnetti, Galago garnettii, O. garnettii, small-eared galago
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.