Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDH17 | CDX1 | ENSOGAP00000002673 | ENSOGAP00000022528 | Cadherin 17. | Caudal type homeobox 1. | 0.439 |
CDH17 | POU5F1 | ENSOGAP00000002673 | ENSOGAP00000000559 | Cadherin 17. | POU domain protein. | 0.485 |
CDX1 | CDH17 | ENSOGAP00000022528 | ENSOGAP00000002673 | Caudal type homeobox 1. | Cadherin 17. | 0.439 |
CDX1 | EPC2 | ENSOGAP00000022528 | ENSOGAP00000008086 | Caudal type homeobox 1. | Enhancer of polycomb homolog. | 0.441 |
CDX1 | GLIS2 | ENSOGAP00000022528 | ENSOGAP00000013613 | Caudal type homeobox 1. | GLIS family zinc finger 2. | 0.416 |
CDX1 | MEDAG | ENSOGAP00000022528 | ENSOGAP00000020420 | Caudal type homeobox 1. | Mesenteric estrogen dependent adipogenesis. | 0.442 |
CDX1 | MEIS1 | ENSOGAP00000022528 | ENSOGAP00000013789 | Caudal type homeobox 1. | Meis homeobox 1. | 0.443 |
CDX1 | OGG1 | ENSOGAP00000022528 | ENSOGAP00000016447 | Caudal type homeobox 1. | 8-oxoguanine DNA glycosylase. | 0.455 |
CDX1 | POU5F1 | ENSOGAP00000022528 | ENSOGAP00000000559 | Caudal type homeobox 1. | POU domain protein. | 0.424 |
CDX1 | SMARCA2 | ENSOGAP00000022528 | ENSOGAP00000015276 | Caudal type homeobox 1. | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2. | 0.489 |
CDX1 | TFF3 | ENSOGAP00000022528 | ENSOGAP00000013000 | Caudal type homeobox 1. | Trefoil factor 3. | 0.463 |
EPC2 | CDX1 | ENSOGAP00000008086 | ENSOGAP00000022528 | Enhancer of polycomb homolog. | Caudal type homeobox 1. | 0.441 |
GLIS2 | CDX1 | ENSOGAP00000013613 | ENSOGAP00000022528 | GLIS family zinc finger 2. | Caudal type homeobox 1. | 0.416 |
GLIS2 | MEIS1 | ENSOGAP00000013613 | ENSOGAP00000013789 | GLIS family zinc finger 2. | Meis homeobox 1. | 0.426 |
GLIS2 | SMARCA2 | ENSOGAP00000013613 | ENSOGAP00000015276 | GLIS family zinc finger 2. | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2. | 0.526 |
MEDAG | CDX1 | ENSOGAP00000020420 | ENSOGAP00000022528 | Mesenteric estrogen dependent adipogenesis. | Caudal type homeobox 1. | 0.442 |
MEIS1 | CDX1 | ENSOGAP00000013789 | ENSOGAP00000022528 | Meis homeobox 1. | Caudal type homeobox 1. | 0.443 |
MEIS1 | GLIS2 | ENSOGAP00000013789 | ENSOGAP00000013613 | Meis homeobox 1. | GLIS family zinc finger 2. | 0.426 |
OGG1 | CDX1 | ENSOGAP00000016447 | ENSOGAP00000022528 | 8-oxoguanine DNA glycosylase. | Caudal type homeobox 1. | 0.455 |
POU5F1 | CDH17 | ENSOGAP00000000559 | ENSOGAP00000002673 | POU domain protein. | Cadherin 17. | 0.485 |
page 1 of 2