STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000317205_05608Unannotated protein. (721 aa)    
Predicted Functional Partners:
GCA_000317205_02242
Unannotated protein.
  
  
  0.732
GCA_000317205_05366
Unannotated protein.
  
     0.712
GCA_000317205_01394
Unannotated protein.
  
  
  0.700
GCA_000317205_05603
Unannotated protein.
  
  
  0.696
GCA_000317205_02767
Unannotated protein.
  
 
 0.659
GCA_000317205_03660
Unannotated protein.
  
     0.641
GCA_000317205_05324
Unannotated protein.
  
     0.641
GCA_000317205_03139
Unannotated protein.
  
     0.639
GCA_000317205_01336
Unannotated protein.
  
 
 0.616
GCA_000317205_05335
Unannotated protein.
  
 
 0.612
Your Current Organism:
Fischerella muscicola
NCBI taxonomy Id: 306281
Other names: F. muscicola PCC 7414, Fischerella muscicola PCC 7414, Fischerella sp. (strain PCC 7414), Fischerella sp. PCC 7414
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.